Type gene symbol for gene of interest for gene summary, statistics, spatial plot and dot plot

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Gene Summary

Spatial gene expression: Spatial plot

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Spot information vs gene expression on reduced dimensions

in this section, users can visualise both Spot information and gene expression side-by-side on low-dimensional representions.

Coexpression of two genes on reduced dimensions

in this section, users can visualise the coexpression of two genes on low-dimensional representions.

Spot information / gene expression violin plot / box plot

in this section, users can visualise the gene expression or continuous Spot information (e.g. Number of UMIs / module score) across groups of Spots (e.g. libary / clusters).

Gene expression bubbleplot / heatmap

in this section, users can visualise the gene expression patterns of multiple genes grouped by categorical Spot information (e.g. library / cluster).
The normalised expression are averaged, log-transformed and then plotted.